memote.experimental.growth

Provide an interface for growth experiments.

Module Contents

Classes

GrowthExperiment Represent a growth experiment.
class memote.experimental.growth.GrowthExperiment(**kwargs)[source]

Bases: memote.experimental.experiment.Experiment

Represent a growth experiment.

SCHEMA = growth.json[source]
load(self, dtype_conversion=None)[source]

Load the data table and corresponding validation schema.

Parameters:
dtype_conversion : dict

Column names as keys and corresponding type for loading the data. Please take a look at the pandas documentation for detailed explanations.
evaluate(self, model)[source]

Evaluate in silico growth rates.