memote.support.essentiality

Supporting functions for stoichiometric consistency checks.

Module Contents

Functions

confusion_matrix(predicted_essential, expected_essential, predicted_nonessential, expected_nonessential) Compute a representation of the confusion matrix.
memote.support.essentiality.LOGGER[source]
memote.support.essentiality.confusion_matrix(predicted_essential, expected_essential, predicted_nonessential, expected_nonessential)[source]

Compute a representation of the confusion matrix.

Parameters:
predicted_essential : set
expected_essential : set
predicted_nonessential : set
expected_nonessential : set
Returns:
dict

Confusion matrix as different keys of a dictionary. The abbreviated keys correspond to the ones used in [1].

References

[1]Wikipedia entry for the Confusion matrix