memote.support.validation

Structurally validate SBML-formatted file input.

Module Contents

Functions

load_cobra_model(path, notifications) Load a COBRA model with meta information from an SBML document.
format_failure(failure) Format how an error or warning should be displayed.
run_sbml_validation(document, notifications) Report errors and warnings found in an SBML document.
memote.support.validation.load_cobra_model(path, notifications)[source]

Load a COBRA model with meta information from an SBML document.

memote.support.validation.format_failure(failure)[source]

Format how an error or warning should be displayed.

memote.support.validation.run_sbml_validation(document, notifications)[source]

Report errors and warnings found in an SBML document.