Perform basic tests on an instance of cobra.Model
.
test_basic.
test_gene_protein_reaction_rule_presence
(read_only_model, store)[source]¶Expect all non-exchange reactions to have a GPR.
test_basic.
test_genes_presence
(read_only_model, store)[source]¶Expect that >= 1 genes are present in the read_only_model.
test_basic.
test_metabolic_coverage
(read_only_model, store)[source]¶Expect a model to have high metabolic coverage.
test_basic.
test_metabolites_charge_presence
(read_only_model, store)[source]¶Expect all metabolites to have a formula.
test_basic.
test_metabolites_formula_presence
(read_only_model, store)[source]¶Expect all metabolites to have a formula.
test_basic.
test_metabolites_presence
(read_only_model, store)[source]¶Expect that >= 1 metabolites are present in the read_only_model.
test_basic.
test_model_id_presence
(read_only_model, store)[source]¶Expect that the read_only_model has an ID.